Overview Indigo is a universal molecular toolkit that can be used for molecular fingerprinting, substructure search, and molecular visualization. Also capable of performing a molecular similarity search, it is 100% open source and provides enhanced stereochemistry support for end users, as well as a documented for developers. Indigo is based on a cheminformatics library that incorporates a number of developed by EPAM, as well as some standard algorithms well-known in the cheminformatics world. Since the core part of Indigo is written in modern C with no third-party code or dependencies except the ubiquitous zlib and libcairo, the toolkit provides outstanding performance and excellent portability.

Indigo is used by many corporations and institutions. This includes some Indigo-based commercial tools developed exclusively for our clients. Also, our open-source chemical search engine is developed on top of the Indigo library. Why Select Indigo as Your Molecular SDK Indigo SDK does not make any restrictions for developers. Whatever your favorite platform is—Java, C#, or Python, not to mention plain C—you can easily integrate Indigo into your application.

All problems you may be afraid of, such as loading binary modules appropriate for the system, or threading issues, or stack overflows, are already solved for you. Also, it is easy to start, as the is very neat. No data types besides the absolute minimum required for it to work. No internal data formats. No painful initialization procedures. Indigo SDK is highly and extensible. You can write C/C/C#/Java/Python plugins for it and distribute them independently.

Indigo has got support from the cheminformatics. Any question or comment you have, you can always post it publicly and get a timely reply from the developers’ team. Features. Input formats support: Molfiles/Rxnfiles v2000 and v3000, SDF, RDF, CML, SMILES, SMARTS. Portability: Pre-built binary packages are provided for Linux and Windows (both 32-bit and 64-bit), and also for Mac OS X systems (both 10.5 and 10.6). Molecule and reaction rendering. Best picture quality among all available products.

Easy SVG support. Automatic layout for SMILES-represented molecules and reactions.

Canonical (isomeric) SMILES computation. Exact matching, substructure matching, SMARTS matching. Matching of tautomers and resonance structures.

Molecule fingerprinting, molecule similarity computation. Fast enumeration of SSSR rings, subtrees, and edge subgraphs.

Molecular weight, molecular formula computation. R-Group deconvolution and scaffold detection.

Pioneer work in computing the exact maximum common substructure for an arbitrary amount of input structures. Plugins support in the API.

As a reference, please see the Renderer plugin distributed together with the Indigo API. Portability Indigo is written from scratch in portable C and supports Linux, Windows, and Mac OS X operating systems. The rendering is done via vector graphics library. And are needed for Cairo. Is used to parse CML files. No other third-party components are used.

Commercial Indigo Renderer Alternatives For Mac

Indigo exposes the to applications. Java and Python wrappers are available for all of the supported platforms. For Windows, there is also a.NET wrapper. All of the the code of Indigo is thread-safe, and so its use does not present a problem in multi-threaded applications. License Copyright © 2009-2014 LifeSciences unit of EPAM Systems, Inc. This program is free software: You can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; version 3 of the License.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If you did not not, please see.